release: 0.1.2

Collects all four artifacts under <repo>/dist/ (PyInstaller and Flatpak
renamed to testium-<version>(.suff); wheel and AppImage keep PEP 427 /
appimage-builder original names). Re-uses scripts/build_env.sh and
set_env.sh, same venv as run.sh. AppImage build.sh now picks the actual
output file dynamically instead of a hardcoded lowercase name.

.gitignore

@@ -8,6 +8,8 @@ dist
 /.vscode
 .venv/
 .flatpak-builder/
+package/flatpak/repo/
+package/flatpak/*.flatpak
 crash.tx*
 report_test.tx*
 *.autosave
@@ -24,6 +26,7 @@ package/appimage/*.AppImage
 package/appimage/src
 package/appimage/*.py
 AppDir
+*.squashfs
 doc/manual/doxygen
 doc/manual/sphinx/build/*
 doc/manual/sphinx/source/_build/*

CLAUDE.md

@@ -183,6 +183,8 @@ Icons are assigned once when the test file is loaded (not updated live on theme
 
 The sub-test's own pass/fail result is intentionally not propagated.
 
+The interpreter and entry point used to spawn the sub-instance are picked automatically by `_testium_launch_cmd()` based on how the parent was started (AppImage → `$APPIMAGE`; Flatpak → `flatpak run`; PyInstaller → the frozen binary; source/wheel → `[sys.executable, abspath(sys.argv[0])]`). The user cannot override either via the YAML — selecting a different testium binary or Python from a sub-test was removed because it was either ill-defined (bundle modes have no separable Python) or could mismatch the parent's environment in surprising ways.
+
 ### Report exporters & plugins
 `src/testium/interpreter/test_report/test_report.py` — `_EXPORTER_REGISTRY` dict maps a format name (cmd key in the YAML `report.export`) to a lazy loader. Built-ins: `text`, `json`, `junit` (needs `junit_xml`), `html` (needs `lxml`). `sqlite` is the storage layer, no-op as an export.
 
@@ -201,17 +203,38 @@ A real-world test plugin lives at `test/validation/fake_exporter/` (CSV exporter
 
 ## Packaging
 
-Three distribution channels coexist, sharing the single `src/testium/` package:
+Four distribution channels coexist, all sharing the single `src/testium/` package and the single `src/requirements.txt` dependency list:
 
-| Channel | Where | Notes |
-|---------|-------|-------|
-| Wheel (`pip install`) | `src/pyproject.toml` | Vanilla Python package; entry point `testium = "testium:main"` |
-| PyInstaller binary | `package/pyinstaller/` | Single ~130 MB binary. `py_func`, `runtime`, `lua_func` bundled at `_MEIPASS` root so the **host** Python can find them when launched as `python3 py_func`. `api`/`interpreter` are **not** exposed (subprocess isolation). |
-| Flatpak | `package/flatpak/` | (Existing recipe, not actively maintained in current refactor wave.) |
+| Channel | Where | Build | Notes |
+|---------|-------|-------|-------|
+| Wheel (`pip install`) | `src/pyproject.toml` | `python -m build` | Vanilla Python package; entry point `testium = "testium:main"`. |
+| PyInstaller binary | `package/pyinstaller/` | `build.sh` | Single ~130 MB binary. `py_func`, `runtime`, `lua_func` bundled at `_MEIPASS` root so the **host** Python can find them when launched as `python3 py_func`. `api`/`interpreter` are **not** exposed (subprocess isolation). |
+| Flatpak | `package/flatpak/` | `build.sh` (uses `flatpak-builder`) | KDE 6.10 runtime. The bundled Python runs only the main process; `py_func` / `lua_func` MUST run under the **host** interpreter (no Python/Lua bundled). Produces a distributable `.flatpak` bundle. |
+| AppImage | `package/appimage/` | `build.sh` (Debian Bookworm container via Podman/Docker) | Bundles Python 3.11 for the main process; `py_func` / `lua_func` MUST run under the **host** interpreter. Build runs in a container so it works on Arch / any non-Debian host. |
 
 The `.deb` work-in-progress lives in `package/deb/`:
 - `test_distro.sh debian:bookworm | debian:trixie | ubuntu:24.04` spins up a Docker/Podman container, reports system package availability, falls back to pip for what's missing (`pyside6` on bookworm/ubuntu, `telnetlib3`, `junit_xml`), runs the validation suite. Currently green on the three targets.
 
+### Host-only py_func / lua_func in sandboxed bundles (Flatpak, AppImage)
+
+The bundled Python (Flatpak's runtime python, AppImage's `python3.11`) is reserved for the **main process only**. Subprocesses (`py_func`, `lua_func`, `git`) must use the host's interpreters and tools so user-installed modules (pyserial, junit_xml, …) are visible. This is enforced by `interpreter/utils/bins.py`:
+
+- `_in_flatpak()` (checks `/.flatpak-info`) and `_in_appimage()` (checks `APPIMAGE` env var) detect the sandbox.
+- `_which(name)` probes only host bin dirs in those modes:
+  - Flatpak: `/run/host/usr/{local/,}bin`, `/run/host/bin` (host mounted via `--filesystem=host-os`).
+  - AppImage: `/usr/local/bin`, `/usr/bin`, `/bin` (we are directly on the host filesystem).
+  - If the host has no python3/lua, `ensure()` raises `ETUMRuntimeError` at test load with the candidate list — no silent fallback to a bundled interpreter.
+- User overrides (`python_bin`/`lua_bin` in globdict): bare names are resolved through `_which()` (host-only), absolute paths are accepted as-is.
+- `apply_host_libs(env)` is called by `py_process.py` / `lua_process.py` on the env passed to Popen:
+  - Flatpak: prepends host lib dirs to `LD_LIBRARY_PATH` so the dynamic linker finds host `.so`'s.
+  - AppImage: strips `$APPDIR`-prefixed entries from `LD_LIBRARY_PATH` / `PYTHONPATH` / `PATH` and drops `PYTHONHOME`, so the host Python doesn't try to load the bundled stdlib/site-packages.
+- `apply_host_lua_paths(env)` (Flatpak only) prepends `/run/host/usr/{lib,share}/lua/X.Y` to `LUA_PATH` / `LUA_CPATH` so `cjson`, `socket`, etc. resolve. Must be called **after** user `lua_env` overrides so host paths win. AppImage relies on host Lua's compiled-in defaults.
+- `py_process.py` additionally pops `PYTHONUSERBASE` (set to `/var/data/python` by the Flatpak runtime, which would hide `~/.local/lib/...`).
+
+### Version reporting (`interpreter/utils/version.py`)
+
+Both Flatpak and AppImage export `TESTIUM_VERSION` from a launcher (Flatpak: launcher script in `org.testium.Testium.yaml`; AppImage: `runtime.env` in `AppImageBuilder.yml`). `get_testium_version()` checks `/.flatpak-info` / `APPIMAGE` and reads `TESTIUM_VERSION` rather than relying on package metadata or repo introspection.
+
 ## Recent fixes / notable changes
 - Restructure: single `src/testium/` Python package (was 4 sibling top-levels: `testium`, `lib`, `py_func`, `lua_func`). `lib/` → `runtime/`, `libs/` → `api/`. `pip install` now produces a clean `site-packages/testium/` with no top-level pollution; `.lua` files travel via `package_data`.
 - `bins.py`: centralised resolution + cache of external `python3` / `lua` binaries. Replaces the scattered `tm.gd("python_bin")`/`tm.gd("lua_bin")` dance and the duplicated discovery logic in `py_process.py`/`lua_process.py`. Validates at test load via `TestSet._validate_runtime_deps()` so missing interpreters fail fast.

README.md

@@ -27,7 +27,19 @@ Pre-built artifacts are published at
   runnable directly, no Python installation required on the host. Lua
   support still needs a system `lua` interpreter and the `lua-socket` /
   `lua-cjson` modules.
-* **Flatpak** — *coming soon.*
+* **Flatpak bundle** (`testium.flatpak`) — install with:
+
+  ```sh
+  # Add Flathub (once, to fetch the KDE/PySide runtimes)
+  flatpak remote-add --user --if-not-exists flathub https://flathub.org/repo/flathub.flatpakrepo
+
+  # Install the bundle
+  flatpak install --user testium.flatpak
+  ```
+
+  After installation testium appears in the desktop application menu and the
+  `testium` command is available in the terminal (requires `~/.local/bin` in
+  `PATH`, which most modern distributions provide by default).
 
 ## Quick start
 

build_all.sh

@@ -0,0 +1,85 @@
+#!/bin/bash
+# Build every distribution channel of testium, in order:
+#   1. Wheel              -> dist/testium-<v>-py3-none-any.whl   (PEP 427 name)
+#   2. PyInstaller binary -> dist/testium-<v>
+#   3. Flatpak bundle     -> dist/testium-<v>.flatpak
+#   4. AppImage           -> dist/Testium-<v>-x86_64.AppImage    (original name)
+# All artifacts are collected (copied) under <repo>/dist/. Original outputs in
+# src/dist/, package/*/dist/ are left in place. The wheel and AppImage keep
+# their original names (which already contain the version); pyinstaller and
+# flatpak are renamed to a normalized testium-<version>(.suff) form.
+#
+# Re-uses scripts/build_env.sh and scripts/set_env.sh — the same pair invoked
+# by run.sh — so the venv at test/tmp/.venv stays the single source of Python
+# dependencies. `build` and `pyinstaller` are installed into that venv on
+# demand if not already there. Flatpak and AppImage build in their own
+# container/sandbox; their build.sh scripts have their own toolchain checks.
+
+set -e
+
+SCRIPT_DIR=$(realpath "$(dirname "$0")")
+VERSION=$(cat "$SCRIPT_DIR/src/VERSION")
+DIST_DIR="$SCRIPT_DIR/dist"
+mkdir -p "$DIST_DIR"
+
+export PY_VENV_NAME=".venv"
+export PY_VENV_DIR="$SCRIPT_DIR/test/tmp/$PY_VENV_NAME"
+export REQ_PATH="$SCRIPT_DIR/src/requirements.txt"
+
+bash "$SCRIPT_DIR/scripts/build_env.sh"
+source "$SCRIPT_DIR/scripts/set_env.sh"
+
+# Ensure wheel/PyInstaller toolchains are present in the venv.
+python -m pip install --quiet --upgrade build pyinstaller
+
+step() {
+    echo
+    echo "================================================================"
+    echo "  $1"
+    echo "================================================================"
+}
+
+# 1. Wheel — PEP 427 name kept (already contains version)
+step "1/4  Wheel (version $VERSION)"
+(
+    cd "$SCRIPT_DIR/src"
+    rm -rf dist build *.egg-info
+    python -m build --wheel
+)
+WHEEL_SRC=$(ls -1t "$SCRIPT_DIR/src/dist"/*.whl | head -1)
+WHEEL="$DIST_DIR/$(basename "$WHEEL_SRC")"
+cp -f "$WHEEL_SRC" "$WHEEL"
+
+# 2. PyInstaller binary
+step "2/4  PyInstaller binary (version $VERSION)"
+bash "$SCRIPT_DIR/package/pyinstaller/build.sh"
+PYI_SRC="$SCRIPT_DIR/package/pyinstaller/dist/testium"
+PYI_BIN="$DIST_DIR/testium-${VERSION}"
+cp -f "$PYI_SRC" "$PYI_BIN"
+
+# 3. Flatpak bundle
+step "3/4  Flatpak bundle (version $VERSION)"
+(
+    cd "$SCRIPT_DIR/package/flatpak"
+    bash build.sh
+)
+FLATPAK_SRC="$SCRIPT_DIR/package/flatpak/testium.flatpak"
+FLATPAK_BUNDLE="$DIST_DIR/testium-${VERSION}.flatpak"
+cp -f "$FLATPAK_SRC" "$FLATPAK_BUNDLE"
+
+# 4. AppImage
+step "4/4  AppImage (version $VERSION)"
+(
+    cd "$SCRIPT_DIR/package/appimage"
+    bash build.sh
+)
+APPIMAGE_SRC=$(ls -1t "$SCRIPT_DIR/package/appimage"/*.AppImage 2>/dev/null | head -1)
+APPIMAGE="$DIST_DIR/$(basename "$APPIMAGE_SRC")"
+cp -f "$APPIMAGE_SRC" "$APPIMAGE"
+chmod +x "$APPIMAGE"
+
+step "All packages built"
+printf "  wheel       : %s\n" "$WHEEL"
+printf "  pyinstaller : %s\n" "$PYI_BIN"
+printf "  flatpak     : %s\n" "$FLATPAK_BUNDLE"
+printf "  appimage    : %s\n" "$APPIMAGE"

package/appimage/AppImageBuilder.yml

@@ -24,9 +24,8 @@ AppDir:
 
     runtime:
         env:
-            SEQUENCER_REV: '{{APP_VERSION}}'
+            TESTIUM_VERSION: '{{APP_VERSION}}'
             PYTHONPATH: $APPDIR/usr/lib/python3.11/site-packages:$APPDIR/usr/lib/python3.11
-            QT_QPA_PLATFORM: xcb
 
         path_mappings:
             - /usr/share/matplotlib/mpl-data/matplotlibrc:$APPDIR/etc/matplotlibrc
@@ -69,12 +68,13 @@ AppDir:
 
         # Set python 3.11 as default
         ln -fs python3.11 $TARGET_APPDIR/usr/bin/python3
-        # Install pip
-        if [ ! -f "get-pip.py" ]; then curl https://bootstrap.pypa.io/get-pip.py -o get-pip.py; fi
+
+        # Bootstrap pip into the AppDir Python
+        if [ ! -f "get-pip.py" ]; then curl -sS https://bootstrap.pypa.io/get-pip.py -o get-pip.py; fi
         python3.11 get-pip.py --break-system-packages
 
         # Install application dependencies in AppDir
-        python3.11 -m pip install --break-system-packages --upgrade --isolated --no-input --ignore-installed --prefix=$TARGET_APPDIR/usr -r requirements.txt
+        python3.11 -m pip install --break-system-packages --upgrade --isolated --no-input --ignore-installed --prefix=$TARGET_APPDIR/usr -r ../../src/requirements.txt
 
         export PIP_CONFIG_FILE=$HOME/.pip/pip.conf
         python3.11 -m pip install --break-system-packages --upgrade --isolated --no-input --ignore-installed --prefix=$TARGET_APPDIR/usr ../../src/dist/testium-{{APP_VERSION}}-py3-none-any.whl

package/appimage/build.sh

@@ -1,12 +1,54 @@
-#!/usr/bin/bash
+#!/bin/bash
+# Build the testium AppImage inside a Debian container (Podman or Docker).
+# The resulting .AppImage file is written to this directory.
 
-export APP_VERSION=$(<../../src/VERSION)
+set -e
 
-appimage-builder --recipe AppImageBuilder.yml
+REPO_ROOT="$(cd "$(dirname "$0")/../.." && pwd)"
+APP_VERSION="$(<"$REPO_ROOT/src/VERSION")"
 
-RESULT=$?
-if [ -n "$1" ] && [ "$1" = "install" ]; then
-    if [ $RESULT -eq 0 ]; then
-        install -v "testium-${APP_VERSION}-x86_64.AppImage" "${HOME}/.local/bin/testium"
-    fi
+if command -v podman &>/dev/null; then
+    RUNTIME=podman
+elif command -v docker &>/dev/null; then
+    RUNTIME=docker
+else
+    echo "Error: neither podman nor docker found." >&2
+    exit 1
+fi
+echo "Using $RUNTIME — building testium $APP_VERSION AppImage..."
+
+# APPIMAGE_EXTRACT_AND_RUN=1 lets appimagetool run without FUSE in the container.
+$RUNTIME run --rm \
+    --privileged \
+    -e APPIMAGE_EXTRACT_AND_RUN=1 \
+    -v "$REPO_ROOT:/work" \
+    -w /work/package/appimage \
+    debian:bookworm bash -c "
+        set -e
+        export DEBIAN_FRONTEND=noninteractive
+
+        apt-get update -qq
+        apt-get install -y -qq \
+            python3 python3-pip python3-venv python3-build \
+            dpkg-dev fakeroot squashfs-tools wget curl file binutils \
+            libglib2.0-0 patchelf zsync > /dev/null
+
+        # Build the wheel
+        cd /work/src
+        python3 -m build --wheel --outdir dist/ > /dev/null
+        cd /work/package/appimage
+
+        # Install appimage-builder
+        pip3 install appimage-builder --quiet --break-system-packages
+
+        # Run the build
+        export APP_VERSION=$APP_VERSION
+        appimage-builder --recipe AppImageBuilder.yml --skip-test
+    "
+
+APPIMAGE_FILE=$(ls -1t Testium-*-x86_64.AppImage 2>/dev/null | head -1)
+echo "Done: ${APPIMAGE_FILE}"
+
+if [ "${1}" = "install" ] && [ -n "${APPIMAGE_FILE}" ]; then
+    install -v "${APPIMAGE_FILE}" "${HOME}/.local/bin/testium"
 fi

package/appimage/requirements.txt

@@ -1,3 +0,0 @@
-tables
-pandas
-scapy

package/flatpak/build.sh

@@ -5,4 +5,22 @@
 # flatpak install flathub org.kde.Sdk//6.10
 # flatpak install flathub io.qt.PySide.BaseApp//6.10
 
-flatpak-builder --user --verbose --force-clean --install build org.testium.Testium.yaml
+set -e
+
+# Build + install local
+flatpak-builder --user --verbose --force-clean --install --repo=repo build org.testium.Testium.yaml
+
+# Génère le bundle distribuable
+flatpak build-bundle repo testium.flatpak org.testium.Testium
+echo "Bundle généré : $(pwd)/testium.flatpak"
+
+# Crée ~/.local/bin/testium pour pouvoir taper "testium" en console
+WRAPPER="$HOME/.local/bin/testium"
+mkdir -p "$HOME/.local/bin"
+cat > "$WRAPPER" <<'EOF'
+#!/bin/sh
+exec flatpak run org.testium.Testium "$@"
+EOF
+chmod +x "$WRAPPER"
+echo "Wrapper installé : $WRAPPER"
+echo "Assurez-vous que ~/.local/bin est dans votre PATH."

package/flatpak/org.testium.Testium-mime.xml

@@ -0,0 +1,7 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<mime-info xmlns="http://www.freedesktop.org/standards/shared-mime-info">
+  <mime-type type="application/x-testium">
+    <comment>Testium test script</comment>
+    <glob pattern="*.tum"/>
+  </mime-type>
+</mime-info>

package/flatpak/org.testium.Testium.desktop

@@ -0,0 +1,10 @@
+[Desktop Entry]
+Name=Testium
+GenericName=Test Sequencer
+Comment=YAML-based test sequencer and runner
+Exec=testium %f
+Icon=org.testium.Testium
+Type=Application
+Categories=Development;
+MimeType=application/x-testium;
+StartupNotify=true

package/flatpak/org.testium.Testium.yaml

@@ -13,7 +13,9 @@ finish-args:
   - --socket=wayland
   - --device=dri
   - --share=network
-  - --filesystem=home # Optionnel : si votre testium doit lire des fichiers utilisateurs
+  - --filesystem=home
+  - --filesystem=/tmp
+  - --filesystem=host-os
 
 build-options:
   build-args:
@@ -41,18 +43,41 @@ modules:
     sources:
       - type: dir
         path: ../../src
+      - type: file
+        path: org.testium.Testium.desktop
+      - type: file
+        path: org.testium.Testium-mime.xml
+      - type: file
+        path: ../../package/testium.png
     build-commands:
-      # On installe le code source dans /app/lib/testium
+      # Code source
       - mkdir -p /app/lib
-      - cp -r . /app/lib/
+      - cp -r testium /app/lib/
+      - cp VERSION /app/lib/testium/VERSION
 
-      # Création du launcher exécutable
+      # Launcher exécutable
       - mkdir -p /app/bin
       - |
         cat <<EOF > /app/bin/testium
         #!/bin/sh
-        # On ajoute le code source et l'extension PySide6 au PYTHONPATH
+        export TESTIUM_VERSION="\$(cat /app/lib/testium/VERSION 2>/dev/null || echo unknown)"
         export PYTHONPATH="/app/lib/testium:/usr/lib/sdk/pyside6/lib/python3.13/site-packages:\$PYTHONPATH"
-        exec python3 /app/lib/testium "\$@"
+        # Expose host binaries (git, python3, lua, …) for subprocess lookups.
+        # PATH is appended (not prepended) so the main process keeps the sandbox python3.
+        export PATH="\$PATH:/run/host/usr/local/bin:/run/host/usr/bin:/run/host/bin"
+        export GIT_PYTHON_GIT_EXECUTABLE="/run/host/usr/bin/git"
+        exec /usr/bin/python3 /app/lib/testium "\$@"
         EOF
       - chmod +x /app/bin/testium
+
+      # Icône
+      - mkdir -p /app/share/icons/hicolor/256x256/apps
+      - cp testium.png /app/share/icons/hicolor/256x256/apps/org.testium.Testium.png
+
+      # Entrée menu
+      - mkdir -p /app/share/applications
+      - cp org.testium.Testium.desktop /app/share/applications/
+
+      # Type MIME pour .tum
+      - mkdir -p /app/share/mime/packages
+      - cp org.testium.Testium-mime.xml /app/share/mime/packages/

release_note.txt

@@ -1,3 +1,20 @@
+version 0.1.2
+==============
+- Flatpak: opening a test from the GUI now correctly finds its companion
+  files (param.yaml, .py scripts, ...).
+
+version 0.1.1
+==============
+- New install channels: Flatpak bundle and AppImage. The AppImage runs
+  on any distribution (built inside a Debian container).
+- About dialog: version is now correct in Flatpak and AppImage builds
+  (used to display "unknown").
+- GUI dialogs no longer hang on pure-Wayland sessions.
+- Plot "last values" API: more tolerant timeout on loaded machines.
+- run item: `testium_path` and `python_bin` parameters removed —
+  sub-instances are launched in the same packaging mode as the parent.
+- License: EUPL-1.2.
+
 version 0.1
 ==============
 - Start of the project

src/LICENSE

@@ -0,0 +1,315 @@
+Copyright (c) 2025-2026 François Dausseur
+
+Licensed under the EUPL
+
+
+                       EUROPEAN UNION PUBLIC LICENCE v. 1.2
+                       EUPL © the European Union 2007, 2016
+
+This European Union Public Licence (the 'EUPL') applies to the Work (as
+defined below) which is provided under the terms of this Licence. Any use of
+the Work, other than as authorised under this Licence is prohibited (to the
+extent such use is covered by a right of the copyright holder of the Work).
+
+The Work is provided under the terms of this Licence when the Licensor (as
+defined below) has placed the following notice immediately following the
+copyright notice for the Work:
+
+        Licensed under the EUPL
+
+or has expressed by any other means his willingness to license under the EUPL.
+
+
+1. Definitions
+
+In this Licence, the following terms have the following meaning:
+
+- 'The Licence': this Licence.
+
+- 'The Original Work': the work or software distributed or communicated by the
+  Licensor under this Licence, available as Source Code and also as Executable
+  Code as the case may be.
+
+- 'Derivative Works': the works or software that could be created by the
+  Licensee, based upon the Original Work or modifications thereof. This Licence
+  does not define the extent of modification or dependence on the Original
+  Work required in order to classify a work as a Derivative Work; this extent
+  is determined by copyright law applicable in the country mentioned in
+  Article 15.
+
+- 'The Work': the Original Work or its Derivative Works.
+
+- 'The Source Code': the human-readable form of the Work which is the most
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+
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+their choice.
+
+
+14. Jurisdiction
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+
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+
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+
+
+                                  Appendix
+
+
+'Compatible Licences' according to Article 5 EUPL are:
+
+- GNU General Public License (GPL) v. 2, v. 3
+- GNU Affero General Public License (AGPL) v. 3
+- Open Software License (OSL) v. 2.1, v. 3.0
+- Eclipse Public License (EPL) v. 1.0
+- CeCILL v. 2.0, v. 2.1
+- Mozilla Public Licence (MPL) v. 2
+- GNU Lesser General Public Licence (LGPL) v. 2.1, v. 3
+- Creative Commons Attribution-ShareAlike v. 3.0 Unported (CC BY-SA 3.0) for
+  works other than software
+- European Union Public Licence (EUPL) v. 1.1, v. 1.2
+- Québec Free and Open-Source Licence — Reciprocity (LiLiQ-R) or Strong
+  Reciprocity (LiLiQ-R+).
+
+The European Commission may update this Appendix to later versions of the
+above licences without producing a new version of the EUPL, as long as they
+provide the rights granted in Article 2 of this Licence and protect the
+covered Source Code from exclusive appropriation.
+
+All other changes or additions to this Appendix require the production of a
+new EUPL version.

src/VERSION

@@ -1 +1 @@
-0.2
+0.1.2

src/testium/api/runtime_plot.py

@@ -1,5 +1,6 @@
 import sys
 import os
+import queue
 import multiprocessing as mp
 from threading import Timer
 from time import sleep, monotonic
@@ -367,7 +368,7 @@ class RuntimePlot:
             self.msg_queue_in.get()
         self.msg_queue_out.put({"command": "last_values"})
         try:
-            res = self.msg_queue_in.get(timeout=1)
-        except:
+            res = self.msg_queue_in.get(timeout=5)
+        except queue.Empty:
             raise ETUMRuntimeError(f"Impossible to retrieve the last values of the \"{self.name}\" plot")
         return res

src/testium/interpreter/test_items/dialog_env.py

@@ -10,6 +10,8 @@ import os
 def setup():
     """Configure the Qt environment for dialog subprocess usage."""
     if sys.platform.startswith('linux'):
-        # On Linux/Wayland, force X11 (via XWayland) to avoid crashes
-        # when Qt is initialized inside a multiprocessing subprocess.
-        os.environ['QT_QPA_PLATFORM'] = 'xcb'
+        if os.environ.get('DISPLAY'):
+            # X11 available: force xcb to avoid crashes in multiprocessing subprocesses.
+            os.environ['QT_QPA_PLATFORM'] = 'xcb'
+        elif os.environ.get('WAYLAND_DISPLAY'):
+            os.environ['QT_QPA_PLATFORM'] = 'wayland'

src/testium/interpreter/test_items/test_item_run.py

@@ -13,6 +13,32 @@ from interpreter.utils.constants import TestItemType as cst
 from runtime.tum_except import ETUMSyntaxError, ETUMRuntimeError, item_load_context
 
 
+def _testium_launch_cmd():
+    """Command prefix to launch a fresh testium instance, runtime-aware.
+
+    AppImage / Flatpak / PyInstaller / wheel / source all need a different
+    entry point than just the path to __main__.py (which may be a .py inside
+    a read-only bundle, or unreachable from the sub-instance's cwd).
+    """
+    # AppImage: the env var holds the path to the .AppImage file itself.
+    appimage = os.environ.get("APPIMAGE")
+    if appimage:
+        return [appimage]
+    # Flatpak: re-launch via the Flatpak app id.
+    if os.path.isfile("/.flatpak-info"):
+        return ["flatpak", "run", "org.testium.Testium"]
+    # PyInstaller frozen exe: sys.executable is the binary itself.
+    if getattr(sys, "frozen", False):
+        return [sys.executable]
+    # Source / wheel: re-use the same Python with the same entry point that
+    # launched this instance, made absolute so cwd changes in the sub-instance
+    # don't break the lookup. argv[0] is either:
+    #  - the package directory (source: `python3 src/testium ...`)
+    #  - the console_scripts wrapper (wheel: `/usr/bin/testium`)
+    # Both are runnable as `python <argv0>`.
+    return [sys.executable, os.path.abspath(sys.argv[0])]
+
+
 def nowInBetween(start, end):
     """
     Check wether current time is within boundaries
@@ -33,8 +59,6 @@ class TestItemRun(TestItem):
         with item_load_context(self.cmd(), self.name(), self.seqFilename()):
             self.tum_file = self._prms.getParam('tum', required=True)
             self.param_file = self._prms.getParam('param_file', default='')
-            self.python_bin = self._prms.getParam('python_bin', default='')
-            self.testium_path = self._prms.getParam('testium_path', default='')
             self.log_path = self._prms.getParam('log_file', default='')
             self.report_path = self._prms.getParam('report_file', default='')
             self.start_time = self._prms.getParam('start_time')
@@ -52,18 +76,9 @@ class TestItemRun(TestItem):
                     '"{}" file could not be found'.format(file_path))
             self.tum_file = file_path
             pf = self._prms.expanse(self.param_file)
-            pp = self._prms.expanse(self.python_bin)
-            sp = self._prms.expanse(self.testium_path)
             lp = self._prms.expanse(self.log_path)
             rp = self._prms.expanse(self.report_path)
-            cmd = []
-            if sp == '':
-                sp = sys.argv[0]
-            if pp != '':
-                cmd.append(pp)
-            elif not os.path.isfile(sp) or not os.access(sp, os.X_OK):
-                cmd.append(sys.executable)
-            cmd.append(sp)
+            cmd = _testium_launch_cmd()
             if tm.text_mode():
                 cmd.append("-b")
             else:

src/testium/interpreter/utils/bins.py

@@ -17,7 +17,7 @@ Public API
 ``reset()``             : clear the cache (mostly useful for tests)
 """
 
-import shutil
+import os
 import subprocess
 
 import api.testium as tm
@@ -30,10 +30,126 @@ from runtime.tum_except import ETUMRuntimeError
 _PYTHON_CANDIDATES = ["python3", "python"]
 _LUA_CANDIDATES = ["lua", "lua5.5", "lua5.4", "lua5.3", "lua5.2", "lua5.1"]
 
+# When running inside a Flatpak, --filesystem=host-os mounts the host at
+# /run/host (read-only). Binaries and libraries from the host are not on the
+# sandbox PATH/LD_LIBRARY_PATH, so we probe and inject them explicitly.
+_FLATPAK_HOST_DIRS = [
+    "/run/host/usr/local/bin",
+    "/run/host/usr/bin",
+    "/run/host/bin",
+]
+_FLATPAK_HOST_LIB_DIRS = [
+    "/run/host/usr/lib",
+    "/run/host/usr/lib64",
+    "/run/host/usr/local/lib",
+]
+
+# Inside an AppImage, AppRun prepends $APPDIR/usr/bin to PATH and exports a
+# bundle-local PYTHONHOME / PYTHONPATH / LD_LIBRARY_PATH. We want py_func and
+# lua_func to run under the *host* interpreter (not the bundled one), so we
+# probe standard host bin dirs directly and scrub APPDIR-prefixed entries from
+# the env passed to host subprocesses.
+_APPIMAGE_HOST_DIRS = [
+    "/usr/local/bin",
+    "/usr/bin",
+    "/bin",
+]
+
+
+def _in_flatpak():
+    return os.path.isfile("/.flatpak-info")
+
+
+def _in_appimage():
+    return "APPIMAGE" in os.environ
+
+
+def apply_host_lua_paths(env):
+    """Prepend host Lua module dirs to LUA_PATH / LUA_CPATH (Flatpak only).
+
+    Must be called after user-defined lua_env overrides are applied, so host
+    paths are always first regardless of user config. User-defined paths remain
+    in the variable but after the host ones.
+    """
+    if not _in_flatpak():
+        return
+    _LUA_VERSIONS = ["5.5", "5.4", "5.3", "5.2", "5.1"]
+    _HOST = "/run/host/usr"
+    cpath_dirs, lpath_dirs = [], []
+    for v in _LUA_VERSIONS:
+        for base in [f"{_HOST}/lib/lua/{v}",
+                     f"{_HOST}/lib64/lua/{v}",
+                     f"{_HOST}/lib/x86_64-linux-gnu/lua/{v}"]:
+            cpath_dirs.append(f"{base}/?.so")
+        lpath_dirs.append(f"{_HOST}/share/lua/{v}/?.lua")
+        lpath_dirs.append(f"{_HOST}/share/lua/{v}/?/init.lua")
+    sep = ";"
+    host_cpath = sep.join(cpath_dirs)
+    host_lpath = sep.join(lpath_dirs)
+    # ;; keeps Lua's compiled-in defaults at the end as last resort
+    env["LUA_CPATH"] = host_cpath + sep + env.get("LUA_CPATH", ";;")
+    env["LUA_PATH"]  = host_lpath + sep + env.get("LUA_PATH",  ";;")
+
+
+def apply_host_libs(env):
+    """Prepare *env* for launching a host binary from inside our bundle.
+
+    - Flatpak: prepend host library dirs to LD_LIBRARY_PATH so the dynamic
+      linker can find host .so files mounted under /run/host.
+    - AppImage: strip $APPDIR-prefixed entries from LD_LIBRARY_PATH and
+      PYTHONPATH and drop PYTHONHOME, so the host interpreter doesn't try
+      to load the bundled (incompatible) Python lib/site-packages.
+    - Otherwise: no-op.
+    """
+    if _in_flatpak():
+        dirs = ":".join(d for d in _FLATPAK_HOST_LIB_DIRS if os.path.isdir(d))
+        if dirs:
+            existing = env.get("LD_LIBRARY_PATH", "")
+            env["LD_LIBRARY_PATH"] = dirs + (":" + existing if existing else "")
+        return
+    if _in_appimage():
+        appdir = os.environ.get("APPDIR", "")
+        if appdir:
+            for var, sep in (("LD_LIBRARY_PATH", ":"),
+                             ("PYTHONPATH", os.pathsep),
+                             ("PATH", os.pathsep)):
+                cur = env.get(var, "")
+                if not cur:
+                    continue
+                cleaned = sep.join(
+                    p for p in cur.split(sep)
+                    if p and not p.startswith(appdir)
+                )
+                if cleaned:
+                    env[var] = cleaned
+                else:
+                    env.pop(var, None)
+        env.pop("PYTHONHOME", None)
+
 
 def _which(name):
-    func = sys_app_path_win if tm.OS() == "Windows" else sys_app_path_lin
-    return func(name)
+    if tm.OS() == "Windows":
+        return sys_app_path_win(name)
+    if _in_flatpak():
+        for d in _FLATPAK_HOST_DIRS:
+            p = os.path.join(d, name)
+            if os.path.isfile(p) and os.access(p, os.X_OK):
+                return p
+        return ""
+    if _in_appimage():
+        for d in _APPIMAGE_HOST_DIRS:
+            p = os.path.join(d, name)
+            if os.path.isfile(p) and os.access(p, os.X_OK):
+                return p
+        return ""
+    return sys_app_path_lin(name)
+
+
+def _probe_env():
+    """Subprocess env for probing host binaries (adds host libs in Flatpak)."""
+    env = os.environ.copy()
+    apply_host_libs(env)
+    return env
 
 
 def _python_version(path):
@@ -41,7 +157,7 @@ def _python_version(path):
     try:
         r = subprocess.run(
             cmd, capture_output=True, text=True,
-            encoding=tm.sys_encoding(), timeout=10,
+            encoding=tm.sys_encoding(), timeout=10, env=_probe_env(),
         )
     except (FileNotFoundError, PermissionError, subprocess.TimeoutExpired):
         return None
@@ -60,6 +176,7 @@ def _lua_version(path):
     try:
         r = subprocess.run(
             [path, "-v"], capture_output=True, text=True, timeout=10,
+            env=_probe_env(),
         )
     except (FileNotFoundError, PermissionError, subprocess.TimeoutExpired):
         return None
@@ -97,8 +214,16 @@ def _resolve(name):
 
     path = ""
     if override:
-        if shutil.which(override) and validator(override):
-            path = override
+        # Absolute path: accept as-is (user knows exactly what they want).
+        # Bare name: resolve via _which() so the override stays host-only in
+        # Flatpak/AppImage instead of silently picking the bundled interpreter.
+        if os.path.isabs(override):
+            resolved = override if (os.path.isfile(override)
+                                    and os.access(override, os.X_OK)) else ""
+        else:
+            resolved = _which(override)
+        if resolved and validator(resolved):
+            path = resolved
         else:
             tm.print_warn(
                 f"Configured {display} interpreter '{override}' is not usable; "

src/testium/interpreter/utils/lua_process.py

@@ -60,6 +60,7 @@ class LuaProcessBase:
 
         lua_env = tm.gd("lua_env", {})
         env = os.environ.copy()
+        bins.apply_host_libs(env)
         if not isinstance(lua_env, dict):
             raise ETUMRuntimeError(f"The 'lua_env' global value should be a dictionary. But it is '{lua_env}'.")
 
@@ -70,6 +71,7 @@ class LuaProcessBase:
                     env[k] = e
                 else:
                     env[k] = e + ";" + env.get(k, "")
+        bins.apply_host_lua_paths(env)
 
         sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
         sock.bind(("localhost", 0))

src/testium/interpreter/utils/py_process.py

@@ -42,6 +42,10 @@ class PyProcessBase:
             raise ETUMRuntimeError(f"The 'py_env' global value should be a dictionary. But it is '{py_env}'.")
 
         env = os.environ.copy()
+        bins.apply_host_libs(env)
+        # PYTHONUSERBASE is set by the Flatpak runtime to isolate sandbox
+        # user packages; remove it so the host Python finds ~/.local packages.
+        env.pop("PYTHONUSERBASE", None)
         for k, v in self.CUST_ENV.items():
             e = py_env.get(k, "")
             if e != "":

src/testium/interpreter/utils/version.py

@@ -31,10 +31,15 @@ def get_version(path :str)-> str:
         return "Warning git not supported in your settings, version of {} unknown".format(path)
 
 def get_testium_version():
+    # Flatpak bundle
+    if os.path.isfile('/.flatpak-info'):
+        ver = os.environ.get('TESTIUM_VERSION', '').strip()
+        return (ver if ver else 'unknown') + " (flatpak release)"
+
     # AppImage
     if 'APPIMAGE' in os.environ:
-        ver = os.getenv('SEQUENCER_REV', 'unknown')
-        return ver + " (binary release)"
+        ver = os.environ.get('TESTIUM_VERSION', '').strip()
+        return (ver if ver else 'unknown') + " (binary release)"
 
     # PyInstaller frozen exe
     if getattr(sys, 'frozen', False):

src/testium/main_win/test_file_manager.py

@@ -212,8 +212,17 @@ class TestFileManager:
         d = ""
         if w.testFile is not None:
             d = os.path.dirname(w.testFile)
+        # In Flatpak the native dialog goes through the XDG document portal,
+        # which returns /run/user/UID/doc/.../test.tum and only exposes the
+        # selected file — sibling files (param.yaml, .py, etc.) are unreachable.
+        # Force Qt's own dialog, which walks the real filesystem mounted via
+        # --filesystem=home and returns a regular path with sibling access.
+        options = QFileDialog.Options()
+        if os.path.isfile("/.flatpak-info"):
+            options |= QFileDialog.Option.DontUseNativeDialog
         file_name, _ = QFileDialog.getOpenFileName(
-            w, "Open the test file", d, "testium file (*.tum);;All Files (*)"
+            w, "Open the test file", d,
+            "testium file (*.tum);;All Files (*)", options=options
         )
         if file_name:
             self.reload(file_name)

src/testium/py_func/__main__.py

@@ -8,16 +8,20 @@ def exception_handler(typ_exc, value, trbk):
     print(f"Critical failure : '{value}'.")
     tb = traceback.format_exception(typ_exc, value, trbk)
     print("".join(tb))
+    print(f"  python    : {sys.executable}")
+    print(f"  sys.path  : {sys.path}")
 
 sys.excepthook = exception_handler
 
-p = Path(__file__)
-p = p.parent / ".."
-p = p.resolve()
-
-sys.path.append(p)
+# Make the parent directory of py_func/ (= the testium package dir, which also
+# contains runtime/, lua_func/, …) the first entry on sys.path so `from py_func
+# import main` and `from runtime…` resolve regardless of cwd or how this script
+# was invoked. str() because some importers don't play well with PathLike entries.
+_pkg_parent = str((Path(__file__).resolve().parent / "..").resolve())
+if _pkg_parent not in sys.path:
+    sys.path.insert(0, _pkg_parent)
 
 from py_func import main
 
 if __name__ == '__main__':
-    main()
+    main()